TY - BOOK AU - Castonguay Yves AU - Bertrand Annick AU - Cloutier Jean AU - Dube Marie-Pier AU - Laberge Serge AU - Michaud Real TI - Molecular physiology and breeding at the crossroads of cold hardiness improvement PY - 2013/// PB - Physiologia Plantarum KW - AFLP KW - Amplified fragment length polymorphism KW - BSA KW - Bulk segregant analysis KW - CBF KW - CNV KW - cold-regulated KW - Copy number variation KW - COR KW - c-repeat binding factor KW - c-repeat/dehydration responsive element KW - CRT/DRE KW - GBS KW - genotyping-by-sequencing KW - InDel KW - insertion and deletion KW - LD KW - linkage disequilibrium KW - marker-assisted selection KW - MAS KW - next-generation sequencing KW - NGS KW - QTL KW - quantitative trait loci KW - random amplified polymorphic DNA KW - RAPD KW - restriction fragment length polymorphism KW - RFLP KW - SCAR KW - sequence related amplified polymorphism KW - sequence-characterized amplified region KW - single-nucleotide polymorphism KW - SNP KW - SRAP KW - TF KW - tolerance to freezing N2 - Alfalfa (Medicago sativa L) is a major forage legume grown extensively worldwide with important agronomic and environmental attributes. Insufficient cold hardiness is a major impediment to its reliable production in northern climates. Improvement of freezing tolerance using conventional breeding approaches is slowed by the quantitative nature of inheritance and strong interactions with the environment. The development of gene-based markers would facilitate the identification of genotypes with superior stress tolerance. Successive cycles of recurrent selection were applied using an indoor screening method to develop populations with significantly higher tolerance to freezing (TF). Bulk segregant analysis of heterogeneous TF populations identified DNA variations that are progressively enriched in frequency in response to selection. Polymorphisms resulting from intragenic variations within a dehydrin gene were identified and could potentially lead to the development of robust selection tools. Our results illustrate the benefits of feedback interactions between germplasm development programs and molecular physiology for a deeper understanding of the molecular and genetic bases of cold hardiness ER -